Test2
Revision as of 23:25, 6 March 2013 by VolkerMorath (Talk | contribs)
There are no parts for this table
There are no parts for this table
There are no parts for this table
There are no parts for this table
| Biosafety: Parts improving biological safety, containment. | |
| Biosynthesis: Parts involved in the production of chemicals and metabolites are listed here. | |
| Biodegradation: Parts involved in the degradation of chemicals are listed here. | |
| Cell-cell signaling and quorum sensing: Parts involved in intercellular signaling and quorum sensing between bacteria. | |
| Cell death: Parts involved in killing cells. | |
| Coliroid: Parts involved in taking a bacterial photograph. | |
| Conjugation: Parts involved in DNA conjugation between bacteria. | |
| DNA binding: Parts involved in xxx. | |
| DNA recombination: Parts involved in DNA recombination are listet here. | |
| Ions: Parts involved in sensing, transport and binding of different ions are listet in here. | |
| Ligand Binding: Parts involved in binding chemical structures are listet here. | |
| Light production and sensing: Parts involved in generation and sensing of light are listet here. | |
| Motility and chemotaxis: Parts involved in motility or chemotaxis of cells are listet here. | |
| Odor production and sensing: Parts that produce or sense odorants aer listet here. | |
| Sensors: Parts used as biosensors are listed here. | |
| Viral vectors: Parts involved in the production and modification of Viral vectors are listet here.. |
Fluorescent Proteins
Featured Parts, [http://www.microscopyu.com/articles/livecellimaging/fpintro.html Nikkon], [http://2012.igem.org/Team:Uppsala_University/Chromoproteins Chromoproteins Uppsala] https://parts.igem.org/Part:BBa_K180009 mBanana
| Name | Exitation [nm] | Emmission [nm] | Quant. yield | Molar extinct. | BioBrick RFC10 | BioBrick RFC25 | Reference |
| Cerulean | 433 | 475 | 0.62 | 43000 | BBa_E2020 | ||
| GFPmut3b | 501 | 511 | BBa_E0040 | ||||
| amilGFP | 503 | 512 | 0.67 | 75200 | BBa_K592010 | [http://www.ncbi.nlm.nih.gov/nuccore/ay646067 GeneBank] | |
| mVenus | 515 | 528 | 0.57 | 92200 | BBa_I757008 | ||
| mOrange | 548 | 562 | 0.69 | 71000 | BBa_E2050 | ||
| mStrawbery | 574 | 596 | 0.29 | 90000 | BBa_K399001 | ||
| mRFP1 | 584 | 607 | 0.25 | 50000 | BBa_E1010 | ||
| mCherry | 587 | 610 | 0.22 | 72000 | BBa_E2060 | ||
| eforRed | 589 | 609 | 0.16 | 111300 | BBa_K592012 | [http://www.ncbi.nlm.nih.gov/nuccore/EU498726 GeneBank] | |
| cjBlue | 610 | BBa_K592011 | [http://www.ncbi.nlm.nih.gov/pubmed/17028187 PubMed] | ||||
| aeBlue | BBa_K864401 | [http://www.ncbi.nlm.nih.gov/pubmed/16164420 PubMed] | |||||
| amilCP | 588 | NA | NA | 8760 | BBa_K592009 | [http://www.ncbi.nlm.nih.gov/nuccore/AY646075 GeneBank] |
| Name | Type | Description | Length | Status |
|---|---|---|---|---|
| BBa_K125502 | Coding | phaB BioPlastic polyhydroxybutyrate synthesis pathway (origin PCC6803 slr1993) | 726 | In stock |
| BBa_K759005 | Coding | phaB (acetoacetyl-CoA reductase orgin from Ralstonia eutropha) | 738 | In stock |
| BBa_K759007 | Translational_Unit | RBS(B0034)and phaB (acetoacetyl-CoA reductase orgin from Ralstonia eutropha) | 756 | In stock |
| BBa_K125501 | Coding | phaA BioPlastic polyhydroxybutyrate synthesis pathway (origin PCC6803 slr1994) | 1233 | It's complicated |
| BBa_K125503 | Coding | phaC BioPlastic polyhydroxybutyrate synthesis pathway (origin PCC6803 slr1830) | 1140 | It's complicated |
| BBa_K125504 | Coding | phaE BioPlastic polyhydroxybutyrate synthesis pathway (origin PCC6803 slr1829) | 996 | It's complicated |
| BBa_K125801 | Translational_Unit | RBS-phaA | 1251 | It's complicated |
| BBa_K125803 | Translational_Unit | RBS-phaC | 1158 | It's complicated |
| BBa_K125804 | Translational_Unit | RBS-phaE | 1014 | It's complicated |
| BBa_K156012 | Coding | phaA (acetyl-CoA acetyltransferase) | 1182 | It's complicated |
| BBa_K156013 | Coding | phaB1 (acetyacetyl-CoA reductase) | 741 | It's complicated |
| BBa_K156014 | Coding | phaC1 (Poly(3-hydroxybutyrate) polymerase) | 1349 | It's complicated |
| BBa_K156015 | Translational_Unit | RBS + phaA | 1201 | It's complicated |
| BBa_K156016 | Translational_Unit | RBS + phaB1 | 760 | It's complicated |
| BBa_K156021 | Generator | Promoter + RBS + phaA + double terminator | 1400 | It's complicated |
| BBa_K156022 | Generator | Promoter + RBS + phaB1 + double terminator | 959 | It's complicated |
| BBa_K156031 | Generator | RBS + phaA + double terminator | 1338 | It's complicated |
| BBa_K156033 | Generator | RBS + phaB1 + double terminator | 897 | It's complicated |
| BBa_K338003 | Composite | PHA Synthase Composite, Part 1/2 | 1303 | It's complicated |
| BBa_K338004 | Composite | PHA Synthase Composite, Part 2/2 | 2253 | It's complicated |
| BBa_K338023 | Composite | Plastic Intermediate: phaB1 + RBS | 761 | It's complicated |
| BBa_K338022 | Composite | Plastic Intermediate: phaA + RBS | 1202 | It's complicated |
| BBa_K338024 | Composite | Plastic Intermediate: phaC1 + Terminator | 1486 | It's complicated |
| BBa_K759004 | Coding | phaA (beta-ketothiolase orgin from Ralstonia eutropha) | 1182 | It's complicated |
| BBa_K759006 | Translational_Unit | B0034 and phaA (beta-ketothiolase orgin from Ralstonia eutropha) | 1200 | It's complicated |
| BBa_K759008 | Translational_Unit | B0034 and phaC (BBa_K342001) | 1809 | It's complicated |
| BBa_K759009 | Translational_Unit | RBS-phaC-RBS-phaA-RBS-phaB | 3781 | It's complicated |
| BBa_K759010 | Composite | P3HB producing construct (without a promoter) | 3918 | It's complicated |
| BBa_K759011 | Composite | P3HB producing construct | 3980 | It's complicated |
| BBa_K2783010 | Coding | Phenylalanine ammonia lyase 2 | 2154 | It's complicated |
| BBa_K125802 | Translational_Unit | RBS-phaB | 744 | Not in stock |
| BBa_K156018 | Composite | Promoter + RBS + phaA | 1263 | Not in stock |
Luciferases
| Name | Organism | Substrate | pH optimum | Amino acids | Mol. mass [kDa] | Emmission [nm] | BioBrick RFC10 | BioBrick RFC25 | Reference |
| Photinus/Firefly luciferase | D-luciferin + ATP | 550 | 60.6 | 578 | BBa_I712019 | ||||
| Renilla luciferase | coelenterazine + O2 | 311 | 36.0 | 480 | BBa_J52008 | ||||
| Gaussia luciferase | coelenterazine + O2 | 189 | 20.3 | 480 | BBa_K509005 | ||||
| Nano luciferase | furimazine | 171 | 19.1 | 460 | [http://www.reportergene.com/2013/01/the-nanoluc-luciferase-reporter-dossier.html 1] |
Photoproteins
(Aequorin, Obelin