Difference between revisions of "Test2"
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Revision as of 23:25, 6 March 2013
There are no parts for this table
There are no parts for this table
There are no parts for this table
There are no parts for this table
Biosafety: Parts improving biological safety, containment. | |
Biosynthesis: Parts involved in the production of chemicals and metabolites are listed here. | |
Biodegradation: Parts involved in the degradation of chemicals are listed here. | |
Cell-cell signaling and quorum sensing: Parts involved in intercellular signaling and quorum sensing between bacteria. | |
Cell death: Parts involved in killing cells. | |
Coliroid: Parts involved in taking a bacterial photograph. | |
Conjugation: Parts involved in DNA conjugation between bacteria. | |
DNA binding: Parts involved in xxx. | |
DNA recombination: Parts involved in DNA recombination are listet here. | |
Ions: Parts involved in sensing, transport and binding of different ions are listet in here. | |
Ligand Binding: Parts involved in binding chemical structures are listet here. | |
Light production and sensing: Parts involved in generation and sensing of light are listet here. | |
Motility and chemotaxis: Parts involved in motility or chemotaxis of cells are listet here. | |
Odor production and sensing: Parts that produce or sense odorants aer listet here. | |
Sensors: Parts used as biosensors are listed here. | |
Viral vectors: Parts involved in the production and modification of Viral vectors are listet here.. |
Fluorescent Proteins
Featured Parts, [http://www.microscopyu.com/articles/livecellimaging/fpintro.html Nikkon], [http://2012.igem.org/Team:Uppsala_University/Chromoproteins Chromoproteins Uppsala] https://parts.igem.org/Part:BBa_K180009 mBanana
Name | Exitation [nm] | Emmission [nm] | Quant. yield | Molar extinct. | BioBrick RFC10 | BioBrick RFC25 | Reference |
Cerulean | 433 | 475 | 0.62 | 43000 | BBa_E2020 | ||
GFPmut3b | 501 | 511 | BBa_E0040 | ||||
amilGFP | 503 | 512 | 0.67 | 75200 | BBa_K592010 | [http://www.ncbi.nlm.nih.gov/nuccore/ay646067 GeneBank] | |
mVenus | 515 | 528 | 0.57 | 92200 | BBa_I757008 | ||
mOrange | 548 | 562 | 0.69 | 71000 | BBa_E2050 | ||
mStrawbery | 574 | 596 | 0.29 | 90000 | BBa_K399001 | ||
mRFP1 | 584 | 607 | 0.25 | 50000 | BBa_E1010 | ||
mCherry | 587 | 610 | 0.22 | 72000 | BBa_E2060 | ||
eforRed | 589 | 609 | 0.16 | 111300 | BBa_K592012 | [http://www.ncbi.nlm.nih.gov/nuccore/EU498726 GeneBank] | |
cjBlue | 610 | BBa_K592011 | [http://www.ncbi.nlm.nih.gov/pubmed/17028187 PubMed] | ||||
aeBlue | BBa_K864401 | [http://www.ncbi.nlm.nih.gov/pubmed/16164420 PubMed] | |||||
amilCP | 588 | NA | NA | 8760 | BBa_K592009 | [http://www.ncbi.nlm.nih.gov/nuccore/AY646075 GeneBank] |
Name | Type | Description | Length | Status |
---|---|---|---|---|
BBa_K125502 | Coding | phaB BioPlastic polyhydroxybutyrate synthesis pathway (origin PCC6803 slr1993) | 726 | In stock |
BBa_K759005 | Coding | phaB (acetoacetyl-CoA reductase orgin from Ralstonia eutropha) | 738 | In stock |
BBa_K759007 | Translational_Unit | RBS(B0034)and phaB (acetoacetyl-CoA reductase orgin from Ralstonia eutropha) | 756 | In stock |
BBa_K125501 | Coding | phaA BioPlastic polyhydroxybutyrate synthesis pathway (origin PCC6803 slr1994) | 1233 | It's complicated |
BBa_K125503 | Coding | phaC BioPlastic polyhydroxybutyrate synthesis pathway (origin PCC6803 slr1830) | 1140 | It's complicated |
BBa_K125504 | Coding | phaE BioPlastic polyhydroxybutyrate synthesis pathway (origin PCC6803 slr1829) | 996 | It's complicated |
BBa_K125801 | Translational_Unit | RBS-phaA | 1251 | It's complicated |
BBa_K125803 | Translational_Unit | RBS-phaC | 1158 | It's complicated |
BBa_K125804 | Translational_Unit | RBS-phaE | 1014 | It's complicated |
BBa_K156012 | Coding | phaA (acetyl-CoA acetyltransferase) | 1182 | It's complicated |
BBa_K156013 | Coding | phaB1 (acetyacetyl-CoA reductase) | 741 | It's complicated |
BBa_K156014 | Coding | phaC1 (Poly(3-hydroxybutyrate) polymerase) | 1349 | It's complicated |
BBa_K156015 | Translational_Unit | RBS + phaA | 1201 | It's complicated |
BBa_K156016 | Translational_Unit | RBS + phaB1 | 760 | It's complicated |
BBa_K156021 | Generator | Promoter + RBS + phaA + double terminator | 1400 | It's complicated |
BBa_K156022 | Generator | Promoter + RBS + phaB1 + double terminator | 959 | It's complicated |
BBa_K156031 | Generator | RBS + phaA + double terminator | 1338 | It's complicated |
BBa_K156033 | Generator | RBS + phaB1 + double terminator | 897 | It's complicated |
BBa_K338003 | Composite | PHA Synthase Composite, Part 1/2 | 1303 | It's complicated |
BBa_K338004 | Composite | PHA Synthase Composite, Part 2/2 | 2253 | It's complicated |
BBa_K338023 | Composite | Plastic Intermediate: phaB1 + RBS | 761 | It's complicated |
BBa_K338022 | Composite | Plastic Intermediate: phaA + RBS | 1202 | It's complicated |
BBa_K338024 | Composite | Plastic Intermediate: phaC1 + Terminator | 1486 | It's complicated |
BBa_K759004 | Coding | phaA (beta-ketothiolase orgin from Ralstonia eutropha) | 1182 | It's complicated |
BBa_K759006 | Translational_Unit | B0034 and phaA (beta-ketothiolase orgin from Ralstonia eutropha) | 1200 | It's complicated |
BBa_K759008 | Translational_Unit | B0034 and phaC (BBa_K342001) | 1809 | It's complicated |
BBa_K759009 | Translational_Unit | RBS-phaC-RBS-phaA-RBS-phaB | 3781 | It's complicated |
BBa_K759010 | Composite | P3HB producing construct (without a promoter) | 3918 | It's complicated |
BBa_K759011 | Composite | P3HB producing construct | 3980 | It's complicated |
BBa_K2783010 | Coding | Phenylalanine ammonia lyase 2 | 2154 | It's complicated |
BBa_K125802 | Translational_Unit | RBS-phaB | 744 | Not in stock |
BBa_K156018 | Composite | Promoter + RBS + phaA | 1263 | Not in stock |
Luciferases
Name | Organism | Substrate | pH optimum | Amino acids | Mol. mass [kDa] | Emmission [nm] | BioBrick RFC10 | BioBrick RFC25 | Reference |
Photinus/Firefly luciferase | D-luciferin + ATP | 550 | 60.6 | 578 | BBa_I712019 | ||||
Renilla luciferase | coelenterazine + O2 | 311 | 36.0 | 480 | BBa_J52008 | ||||
Gaussia luciferase | coelenterazine + O2 | 189 | 20.3 | 480 | BBa_K509005 | ||||
Nano luciferase | furimazine | 171 | 19.1 | 460 | [http://www.reportergene.com/2013/01/the-nanoluc-luciferase-reporter-dossier.html 1] |
Photoproteins
(Aequorin, Obelin