Difference between revisions of "Test2"
VolkerMorath (Talk | contribs) (→Fluorescent Proteins) |
VolkerMorath (Talk | contribs) (→Fluorescent Proteins) |
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|Reference | |Reference | ||
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| − | |Cerulean | + | |style="background:#FFFF00" |Cerulean |
|433 | |433 | ||
|475 | |475 | ||
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| − | |GFPmut3b | + | |style="background:#FFFF00" |GFPmut3b |
|501 | |501 | ||
|511 | |511 | ||
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|- | |- | ||
| − | |amilGFP | + | |style="background:#FFFF00" |amilGFP |
|503 | |503 | ||
|512 | |512 | ||
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|[http://www.ncbi.nlm.nih.gov/nuccore/ay646067 GeneBank] | |[http://www.ncbi.nlm.nih.gov/nuccore/ay646067 GeneBank] | ||
|- | |- | ||
| − | |mVenus | + | |style="background:#FFFF00" |mVenus |
|515 | |515 | ||
|528 | |528 | ||
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|- | |- | ||
| − | |mOrange | + | |style="background:#FFFF00" |mOrange |
|548 | |548 | ||
|562 | |562 | ||
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|- | |- | ||
| − | |mStrawbery | + | |style="background:#FFFF00" |mStrawbery |
|574 | |574 | ||
|596 | |596 | ||
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|- | |- | ||
| − | |mRFP1 | + | |style="background:#FFFF00" |mRFP1 |
|584 | |584 | ||
|607 | |607 | ||
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|- | |- | ||
| − | |mCherry | + | |style="background:#FFFF00" |mCherry |
|587 | |587 | ||
|610 | |610 | ||
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|- | |- | ||
| − | |eforRed | + | |style="background:#FFFF00" |eforRed |
|589 | |589 | ||
|609 | |609 | ||
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|[http://www.ncbi.nlm.nih.gov/nuccore/EU498726 GeneBank] | |[http://www.ncbi.nlm.nih.gov/nuccore/EU498726 GeneBank] | ||
|- | |- | ||
| − | |cjBlue | + | |style="background:#FFFF00" |cjBlue |
|610 | |610 | ||
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|[http://www.ncbi.nlm.nih.gov/pubmed/17028187 PubMed] | |[http://www.ncbi.nlm.nih.gov/pubmed/17028187 PubMed] | ||
|- | |- | ||
| − | |aeBlue | + | |style="background:#FFFF00" |aeBlue |
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|[http://www.ncbi.nlm.nih.gov/pubmed/16164420 PubMed] | |[http://www.ncbi.nlm.nih.gov/pubmed/16164420 PubMed] | ||
|- | |- | ||
| − | |amilCP | + | |style="background:#FFFF00" |amilCP |
|588 | |588 | ||
|NA | |NA | ||
Revision as of 21:35, 6 March 2013
| Biosafety: Parts improving biological safety, containment. | |
| Biosynthesis: Parts involved in the production of chemicals and metabolites are listed here. | |
| Biodegradation: Parts involved in the degradation of chemicals are listed here. | |
| Cell-cell signaling and quorum sensing: Parts involved in intercellular signaling and quorum sensing between bacteria. | |
| Cell death: Parts involved in killing cells. | |
| Coliroid: Parts involved in taking a bacterial photograph. | |
| Conjugation: Parts involved in DNA conjugation between bacteria. | |
| DNA binding: Parts involved in xxx. | |
| DNA recombination: Parts involved in DNA recombination are listet here. | |
| Ions: Parts involved in sensing, transport and binding of different ions are listet in here. | |
| Ligand Binding: Parts involved in binding chemical structures are listet here. | |
| Light production and sensing: Parts involved in generation and sensing of light are listet here. | |
| Motility and chemotaxis: Parts involved in motility or chemotaxis of cells are listet here. | |
| Odor production and sensing: Parts that produce or sense odorants aer listet here. | |
| Sensors: Parts used as biosensors are listed here. | |
| Viral vectors: Parts involved in the production and modification of Viral vectors are listet here.. |
Fluorescent Proteins
Featured Parts, [http://www.microscopyu.com/articles/livecellimaging/fpintro.html Nikkon], [http://2012.igem.org/Team:Uppsala_University/Chromoproteins Chromoproteins Uppsala] https://parts.igem.org/Part:BBa_K180009 mBanana
| Name | Exitation [nm] | Emmission [nm] | Quant. yield | Molar extinct. | BioBrick RFC10 | BioBrick RFC25 | Reference |
| Cerulean | 433 | 475 | 0.62 | 43000 | BBa_E2020 | ||
| GFPmut3b | 501 | 511 | BBa_E0040 | ||||
| amilGFP | 503 | 512 | 0.67 | 75200 | BBa_K592010 | [http://www.ncbi.nlm.nih.gov/nuccore/ay646067 GeneBank] | |
| mVenus | 515 | 528 | 0.57 | 92200 | BBa_I757008 | ||
| mOrange | 548 | 562 | 0.69 | 71000 | BBa_E2050 | ||
| mStrawbery | 574 | 596 | 0.29 | 90000 | BBa_K399001 | ||
| mRFP1 | 584 | 607 | 0.25 | 50000 | BBa_E1010 | ||
| mCherry | 587 | 610 | 0.22 | 72000 | BBa_E2060 | ||
| eforRed | 589 | 609 | 0.16 | 111300 | BBa_K592012 | [http://www.ncbi.nlm.nih.gov/nuccore/EU498726 GeneBank] | |
| cjBlue | 610 | BBa_K592011 | [http://www.ncbi.nlm.nih.gov/pubmed/17028187 PubMed] | ||||
| aeBlue | BBa_K864401 | [http://www.ncbi.nlm.nih.gov/pubmed/16164420 PubMed] | |||||
| amilCP | 588 | NA | NA | 8760 | BBa_K592009 | [http://www.ncbi.nlm.nih.gov/nuccore/AY646075 GeneBank] |
| Name | mVenus (YFP) | mCherry (CFP) | mOrange | mCerulean | RFP | eforRed | cjBlue | aeBlue | amilGFP | amilCP | mStrawberry | |
| Color | yellow | light pink | ||||||||||
| BioBricks RFC10 | BBa_E0040 ?? E1010 | BBa_E2060 | BBa_J06504 | BBa_E2050 | BBa_E2020 | BBa_K592012 | BBa_K592011 | BBa_K864401 | BBa_K592010 | BBa_K592009 | BBa_K399001 | |
| BioBricks RFC25 | BBa_I757008 |
Fluciferases
| Name | Photinus luciferase | Renilla luciferase | Gaussia luciferase | Nano Luciferase |
| Reference | [http://www.reportergene.com/2013/01/the-nanoluc-luciferase-reporter-dossier.html] | |||
| Organism | ||||
| Substrate | ||||
| pH optimum | ||||
| Substrate | ||||
| Amino acids | ||||
| Molecular mass | ||||
| BioBricks RFC 10 | ||||
| BioBricks RFC 25 | BBa_I712019 | BBa_J52008 | BBa_K509005 |
=Photoproteins= (Aequorin, Obelin