Part:BBa_K2656104
sfGFP transcriptional unit 5
Constitutive expressed transcriptional unit assembled with a one-pot [http://2018.igem.org/Team:Valencia_UPV/Design Level 1] Golden Gate reaction using BsaI type IIS endonuclease.
This transcriptional unit is composed of the following standardized parts from our [http://2018.igem.org/Team:Valencia_UPV/Part_Collection Part Collection]:
- BBa_K2656004: the J23106 constitutive promoter in its Golden Braid compatible version
- BBa_K2656012: the J61101 very weak ribosome biding site in its Golden Braid compatible version
- BBa_K2656013: the BBa_I746916 sfGFP sequence in its Golden Braid standardized version
- Terminator BBa_K2656026: the B0015 transcriptional terminator in its Golden Braid compatible version
This transcriptional unit has been used to characterize the RBS basic part BBa_K2656012. Following this [http://2018.igem.org/Team:Valencia_UPV/Modeling#http://2018.igem.org/Team:Valencia_UPV/Experiments#exp_protocol experimental protocol], we have obtained the parameters to valide our [http://2018.igem.org/Team:Valencia_UPV/Modeling#models constitutive model] and the results of the next graphs have been obtained after an optimization and decision-making process, in which the optimal parameters have been selected and the constituent model for each objective has been simulated and compared with the experimental data.
| Table 2. BBa_K2656012 relative strength and p ratio. | |||
| Parameter | Value | ||
| Relative strength | 0.032 | ||
| p parameter ratio (pRBS/pref) | 0.032 | ||
| PoI degradation rate | RBS Experiment 2: dp = 0.00818 min-1 | ||
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 11
Illegal NheI site found at 34 - 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000INCOMPATIBLE WITH RFC[1000]Illegal SapI.rc site found at 75
| None |