Composite

Part:BBa_K1412614

Designed by: Ruihua Zhang   Group: iGEM14_XMU-China   (2014-10-01)
Revision as of 14:24, 11 October 2014 by D (Talk | contribs)

Characterize the efficiency of promoter(BBa_K206000) with chemotaxis


BBa_K1412614: pBAD- RBS (1.0)-CheZ-TT

This part consists of a [http://en.wikipedia.org/wiki/Chemotaxis CheZ] gene which can express CheZ protein deciding E.coli whether tumbling or swimming straight. In this light, we can characterize the efficiency of promoter by just replacing different promoters before a CheZ gene. Then we can characterize the efficiency of promoter via measuring the migration distance positively associated with the expression strength of CheZ protein.


Characterization process design.png


Usage


When we want to characterize the efficiency of promoter, we usually link the promoter with GFP, then characterize the efficiency of promoter by measuring the fluorescence intensity of GFP. In our part, you need just link RBS (1.0) after a pBAD promoter and before a CheZ gene, ended with a TT terminator (pBAD-RBS (1.0)-CheZ-TT). Then transfer this gene circuit into E.coli (CheZ knocked out), coat plates, and culture on semi-solid medium to measure the migration diameter of E.coli.


Relevant parts


BBa_K1412000: pLac-RBS(1.0)-CheZ-TT CheZ generator under pLac promoter

BBa_K1412005: RBS(1.0)-CheZ-TT

BBa_K1412006: RBS(0.01)-CheZ-TT

BBa_K1412007: RBS(0.3)-CheZ-TT

BBa_K1412014: pTetR-RBS(1.0)-CheZ-TT Characterize the efficiency of promoters with chemotaxis

BBa_K1412801: pLac-RBS(0.01)-CheZ-TT Characterize the efficiency of RBS with chemotaxis

BBa_K1412829: Plac-RBS(0.3)-CheZ-TT Characterize efficiency of RBS with chemotaxis


Notes


Source

BBa_K206000

BBa_B0034

BBa_K629003

BBa_B0015


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 125
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 65
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Reference



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