Coding

Part:BBa_K4390025

Designed by: Maarten van den Ancker   Group: iGEM22_Edinburgh-UHAS_Ghana   (2022-08-07)


Si-tag :: Gly-Ser Linker

This part is not compatible with BioBrick RFC10 assembly but is compatible with the iGEM Type IIS Part standard which is also accepted by iGEM.

This is a Level 0 part of type N-O part generating the following 4 base overhangs at upstream (AATG).

Usage and Biology

This is an NO part containing a silica-binding tag and a glycine-serine linker. The silica-binding tag allows for the expressed level 1 construct to bind to silica, while the glycine-serine linker introduces a short unstructured domain, minimising the risk of the silica tag interfering with the activity of other parts. The 2022 Edinburgh-UHAS iGEM team used this part to bind metallothioneins to silica beads. It does not have TTCG at the end to complete the sequence, as this is regenerated by the O part 3' fusion site in JUMP assembly. Add TTCG at the end to use as a normal part.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NotI site found at 14
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None