Other
Part:BBa_J70444
Designed by: Julie Norville Group: Knight Lab (2009-08-17)
yfp RBS, {0,5;15,10} family member - level 100 (reverse oligo)
These oligo parts can be used for converting any pathway of the form (Promoter X)-(Bioscaffold part {0,5;5,0})-YFP to (Promoter X)-(RBS level Y)-YFP.
Note that this removes the scar on the right side of the RBS, except when traditional BioBrick derived RBSes have been used (for example BBa_B0034.)
Also gtg starts are removed to make the RBS more predictable.
Form of insert:
{promoter} ta ctaga ^ g {rbs master sequence} a tgagc ^ {rest of YFP (E0030)}
{promoter} at ^ gatct c {rbs master sequence} t^ actcg {rest of YFP (E0030)}
Forward oligo:
g {rbs master sequence} a tgagc
Reverse oligo:
Reverse complement of (ctagag {rbs master sequence} a)
Usage and Biology
yfp RBS, {0,5;15,10} family member - level 10 (calculated 9.8) Master sequence=BBa_J70439, forward oligo=BBa_J70440, or reverse oligo=BBa_J70441 yfp RBS, {0,5;15,10} family member - level 100 (calculated 110.5) Master sequence=BBa_J70442, forward oligo=BBa_J70443, or reverse oligo=BBa_J70444 yfp RBS, {0,5;15,10} family member - level 1000 (calculated 1051.4) Master sequence=BBa_J70445, forward oligo BBa_J70446, or reverse oligo BBa_J70447 yfp RBS, {0,5;15,10} family member - level 10000 (calculated 9096.9) Master sequence=BBa_J70448, forward oligo=BBa_J70449, or reverse oligo=BBa_J70450 yfp RBS, {0,5;15,10} family member - level 100000 (calculated 107160.2) Master sequence=BBa_J70451, forward oligo=BBa_J70452, or reverse oligo=BBa_J70453 yfp RBS, {0,5;15,10} family member - B0029 simulator (calculated 27.8) Master sequence=BBa_B0029, forward oligo=BBa_J70454, or reverse oligo=BBa_J70455 yfp RBS, {0,5;15,10} family member - B0030 simulator (calculated 413.8) Master sequence=BBa_B0030, forward oligo=BBa_J70456, or reverse oligo=BBa_J70457 yfp RBS, {0,5;15,10} family member - B0031 simulator (calculated 38.2) Master sequence=BBa_B0031, forward oligo=BBa_J70458, or reverse oligo=BBa_J70459 yfp RBS, {0,5;15,10} family member - B0032 simulator (calculated 67.9) Master sequence=BBa_B0032, forward oligo=BBa_J70460, or reverse oligo=BBa_J70461 yfp RBS, {0,5;15,10} family member - B0033 simulator (calculated 4.1) Master sequence=BBa_B0033, forward oligo=BBa_J70462, or reverse oligo=BBa_J70463 yfp RBS, {0,5;15,10} family member - B0034 simulator (calculated 378) Master sequence=BBa_B0034, forward oligo=BBa_J70464, or reverse oligo=BBa_J70465 yfp RBS, {0,5;15,10} family member - B0035 simulator (calculated 470) Master sequence=BBa_B0035, forward oligo=BBa_J70466, or reverse oligo=BBa_J70467
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]
[edit]
Categories
Parameters
None |