Generator

Part:BBa_K822003

Designed by: Jarle Pahr   Group: iGEM12_NTNU_Trondheim   (2012-09-25)
Revision as of 13:45, 26 September 2012 by Jarlemag (Talk | contribs)

Constitutive YFP generator

Yellow Fluorescent Protein coding sequence (BBa_E0030) expressed under a constitutive promoter (BBa_J23100) for use as positive control in fluorescence measurement experiments.


Testing

The part was tested using a Tecan Infinite 200 Pro plate reader for fluorescence measurements. Using this instrument, using excitation and emission wavelengths of 514 and 544 nm respectively was found to be most suitable. A culture of E. coli strain DH5a containing the part was incubated for ~24 h at 37 C with shaking. Cells containing a construct with GFP (BBa_K082003) under the Jen1 promoter (BBa_K284002) were not expected to express GFP under the conditions and were used as a negative control. Fluorescence was measured using 100 uL samples in Nunclon 96-well flat bottom black polystyrol plates.

YFP fluorescence 1.png

The fluorescence measurements above are not corrected for cell concentration (OD).Further experiments were made in connection with testing of oxygen-sensitive promoters, with averaging of readings and corrections made for the measured OD of the cell cultures that were sampled. These experiments failed to show activity by the oxygen-sensitive promoters, but provided further evidence for expression of YFP under the constitutive promoter.

YFP fluorescence2.png


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
//classic/reporter/constitutive
Parameters
emissionYFP
emit527
excite514
proteinEYFP
strainDH5a
tagNone