Composite
Part:BBa_K5107002
Designed by: Georgios Retsinias Group: iGEM24_DTU-Denmark (2024-09-22)
HRE5
HRE5 is the five tandem repeats of the HRE minimal:(BBa_K5107000) to increase the interaction surface of the hormone receptor with the DNA.
Usage and Biology
Previously, in-cell systems have successfully used five tandem repeats of the REs for different human hormonal receptors[1]. Inserted in plasmids such as those we used for our in cell-assay, it is shown efficient to express Lac-Z when the associated hormone-receptor complex is present in the cell. In this manner, hormone work as trancription activator.
Assemply
- These elements are part of the plasmid fist presented by (Miller et all,2010)[1]. For the list of the plasmid check BBa_K5107000.
- We used specific primers to amplify the REs from two of these plasmids(pRR-ERalpha-5Z,pRR-MR-5Z). The plamsids were a gift from Charles Miller (Addgene plasmid # 23061, # 23059 ; http://n2t.net/addgene:23061,http://n2t.net/addgene:23059 ; RRID:Addgene_23061,RRID:Addgene_23059).
Forward Primer | Reverse Primer | |
---|---|---|
HRE5 | ataggtagaNCCGTCTGGTACAGGGTGTTCTT | atgtgggNCCCCGGGAAAAAGAACACCCTGTA |
ERE5 | ataggtagaNCCCAGGTCAGAGTGACCTG | atgtgggNCCGACCCCGGGAAAAAGC |
- After that, USER Cloning was performed so the final constucts are derived. BBa_K5107006 and BBa_K5107012
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]
References
- Miller, C. A., Tan, X., Wilson, M., Bhattacharyya, S., & Ludwig, S. (2010). Single plasmids expressing human steroid hormone receptors and a reporter gene for use in yeast signaling assays. Plasmid, 63(2), 73–78. https://doi.org/10.1016/j.plasmid.2009.11.003
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Categories
Parameters
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