Difference between revisions of "Part:BBa K338004:Design"

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===References===
 
===References===
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# Lee, SY. Bacterial polyhydroxyalkanoates. ''Biotechnology and Bioengineering'' '''49''', 1-14 (1996).

Revision as of 11:13, 26 October 2010

PHA Synthase Composite, Part 2/2


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 1348
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 697
    Illegal AgeI site found at 1047
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

When ligated downstream of BBa_K338003, the completed construct was designed to express all three PHA synthase genes required to make PHB oligomers from soybean oil. The three genes would be transcribed polycistronically on a single mRNA transcript under the IPTG-inducible control of the BBa_K215000 promoter. Naturally, each gene is preceded by a standard RBS (BBa_B0034) and the transcript finishes with a strong terminator (BBa_B0015), for a total size of about 3500bp.

Note that these three genes should only cause the production of PHB oligomers in cells, not hardened plastic. A crosslinking agent is required to link the oligomers and form the final plastic product. Over-expression of the phaC1 gene could cause some crosslinking, but this has not been experimentally verified.

SY Lee describes how a similar gene construct (pSYL105) was used to produce very large amounts of PHB, up to 80-90% of the dry cell weight, under certain conditions. Synthesis of PHB is related to the amount of acetyl-CoA available - synthesis was bolstered in the presence of complex nitrogen sources, amino acids, or oleic acid. He also mentions that PHB production was highly dependent on the particular bacterial strain used. [1]

Source

Registry of Standard Biological Parts

References

  1. Lee, SY. Bacterial polyhydroxyalkanoates. Biotechnology and Bioengineering 49, 1-14 (1996).