Difference between revisions of "Part:BBa K182005"
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<partinfo>BBa_K182005 short</partinfo> | <partinfo>BBa_K182005 short</partinfo> | ||
| − | This is a part using the biobrick BBa_K182004 as the upstream part and <html><a href="https://parts.igem.org/Part:BBa_S03518">BBa_S03518</a></html> as the downstream part. | + | This is a part using the biobrick <html><a href="https://parts.igem.org/Part:BBa_K182004">BBa_K182004</a></html> as the upstream part and <html><a href="https://parts.igem.org/Part:BBa_S03518">BBa_S03518</a></html> as the downstream part. |
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| + | BBa_K182004 is a cI regulated promoter. The promoter has two binding sites for the cI repressor and is repressed when it binds.It is identical to <html><a href="https://parts.igem.org/Part:BBa_R0051">BBa_R0051</a></html> apart from a point mutation in the -35 promoter binding region(15th base is C instead of T). | ||
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| + | BBa_S03518 is a TetR protein with a Ribosome Binding site upstream and an LVA tag attached to its end. TetR binds to TetR regulated promoters such as <html><a href="https://parts.igem.org/Part:BBa_R0040">BBa_R0040</a></html>. <html><a href="http://openwetware.org/wiki/ATc">ATC (anhydrotetracycline)</a></html> binds to TetR causing it to be released from the promoter and reintroducing transcription. | ||
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This part comes without a terminator. | This part comes without a terminator. | ||
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| − | [[Image: | + | [[Image:5DanAberdeenigem2009fixed.png|center|300 px]] |
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Transforming BBa_K182005 into these cells should stop the production of CFP, if it works as anticipated, due to our Tet repressor binding to the Tet Operator which would stop the expression of CFP. | Transforming BBa_K182005 into these cells should stop the production of CFP, if it works as anticipated, due to our Tet repressor binding to the Tet Operator which would stop the expression of CFP. | ||
| − | [[Image: | + | [[Image:1DanAberdeenigem2009fixed.png|center|400 px]] |
| − | Since K182005 is on an Ampicillin / | + | Since K182005 is on an Ampicillin / chloramphenicol vector (pSB1AC3) and I13600 is on an Ampicillin vector, we decided to first transform I13600 into a cell and select for Ampicillin. We then checked for CFP expression and made the cells competent. After this we transformed K182005 into these cells and selected for Chloramphenicol. |
With both plasmids now in the cell we checked for fluorescence as can be seen in the picture below. | With both plasmids now in the cell we checked for fluorescence as can be seen in the picture below. | ||
Latest revision as of 21:34, 23 September 2009
TetR regulated by CI operator (RBS+, Term-) with LVA tag
This is a part using the biobrick BBa_K182004 as the upstream part and BBa_S03518 as the downstream part.
BBa_K182004 is a cI regulated promoter. The promoter has two binding sites for the cI repressor and is repressed when it binds.It is identical to BBa_R0051 apart from a point mutation in the -35 promoter binding region(15th base is C instead of T).
BBa_S03518 is a TetR protein with a Ribosome Binding site upstream and an LVA tag attached to its end. TetR binds to TetR regulated promoters such as BBa_R0040. ATC (anhydrotetracycline) binds to TetR causing it to be released from the promoter and reintroducing transcription.
This part comes without a terminator.
BBa_K182005
This part was constructed using a copy of BBa_R0051 (Lambda CI Promoter) with a point mutation as the upstream part and BBa_S03518 (RBS + TetR) as the downstream part. Even though this BioBrick was lacking a terminator we were able to test it, by transforming it into E.coli together with BBa_I13600.
BBa_I13600 contains a TetOperator (which is repressed by the Tet Repressor) and controls expression of Cyan Florescent Protein (CFP). Under normal circumstances the BBa_I13600 expresses CFP and this can be visualised under a florescent microscope.
Transforming BBa_K182005 into these cells should stop the production of CFP, if it works as anticipated, due to our Tet repressor binding to the Tet Operator which would stop the expression of CFP.
Since K182005 is on an Ampicillin / chloramphenicol vector (pSB1AC3) and I13600 is on an Ampicillin vector, we decided to first transform I13600 into a cell and select for Ampicillin. We then checked for CFP expression and made the cells competent. After this we transformed K182005 into these cells and selected for Chloramphenicol.
With both plasmids now in the cell we checked for fluorescence as can be seen in the picture below.
As can be seen in the picture we observed no fluorescence, however once we added Anhydrotetracycline we found that CFP was yet again expressed, indicating that the K182005 does in fact express the Tet Repressor protein and that this protein works as expected.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]