Coding
zif23

Part:BBa_C2001

Designed by: Drew Endy   Group: Antiquity   (2004-01-29)

Zif23-GCN4 engineered repressor (+LVA, C2000 codon-optimized for E.coli)

Variant of Zif23-GCN4 (see Part:BBa_C2000). CDS has been optimized (via VNTI) for expression in enteric bacteria. ssrA tag (LVA) added.


Usage and Biology

Protein Database (PDB) Entry: [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1llm link]

Wolfe et al., "Structure of a Designed Dimeric Zinc Finger Protein Bound to DNA" [http://pubs.acs.org/cgi-bin/sample.cgi/bichaw/2003/42/i46/html/bi034830b.html link] Biochemistry 42:13401


Sequence and Features


Barcodes are discontinued, but one was appended to the sequence of this part. Composite parts using this part will include the barcode. More ...

Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 319
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 79
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
//cds
//cds/transcriptionalregulator/repressor
//function/regulation/transcriptional
Parameters
directionForward
functionRep
ligands?
proteinZif23-GCN4
swissproP03069
tagLVA