Reporter
CBDcex(J61

Part:BBa_K863104:Design

Designed by: Moritz Müller   Group: iGEM12_Bielefeld-Germany   (2012-09-21)

Cellulose binding Domain from C. Fimi with const. Promotor and GFP


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal XbaI site found at 37
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal XbaI site found at 37
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal XbaI site found at 37
    Illegal NgoMIV site found at 65
    Illegal AgeI site found at 1136
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 1047


Design Notes

This part is was made by a mixture of Freiburg-assembly of BBa_K863101 and BBa_K863121 and suffix insertion into BBa_J61101. Its purpose was to analyze of the expression problem of a similar construct with a T7-promoter.

The Biobrick was designed to express the cellulose binding domain of Cellulomonas fimi exoglucanase (CBDcex) with a fused GFP as a reporter protein with a constitutive promoterBBa_J23100. 12 additional conserved bases (4 AS) were isolated upstream of the cellulose binding domain and 9 bases downstream of the exoglucanase gene. A short C-terminal (Glycine, Serine) linker and the Freiburg-scar connect the CBD to GFP. For easy capturing a His-tag was added to the C-terminal end of the GFP.

Source

The origin of this part is a cloning-vector from the fermentation group of Bielefeld University (the cellulose domain) and BBa_K863121 as template for the GFP-fusion protein.

References