Protein_Domain

Part:BBa_M50037

Designed by: Amanda Urke   Group: Stanford BIOE44 - S11   (2016-12-11)


Glucose Binding Protein of Thermus thermophilus

This bacterial glucose binding protein (GBP) is derived from the genome sequence of Thermus thermophilus that was published in 2004 by Henne et al. In 2006, Cuneo et al. analyzed the sequence of this particular GBP, determined its X-ray crystal structure and characterized the stability of glucose-binding. The GBP is composed of two domains separated by a hinge, maintaining an open conformation when unbound to glucose and a closed conformation when bound. When flanked with an RFP fluorophore on the N-terminus and a GFP fluorophore on the C-terminus, these conformation changes facilitated FRET-based analysis of glucose binding. In addition, this GBP was selected for its reasonably short sequence length (1242bp) and stable glucose binding ability (Kd value of 0.08(+/- 0.03) mM). According to Cuneo et al., this T. thermophilus GBP shares more structural homology with maltose binding proteins than glucose binding proteins. However, we were able to obtain FRET when glucose was added, suggesting that glucose is a ligand for this protein.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None