Coding

Part:BBa_M36670

Designed by: Richard Fuisz   Group: Stanford BIOE44 - S11   (2014-10-24)


Bxb1 Recombinase + NLS on N terminus

This is a Bxb1 integrase with a Nuclear Localization Site added to the N terminus, prior to the stop codon. This NLS should allow Bxb1 to be integrated into the nucleus of a eukaryotic chassis organism. Bxb1 is part of the serine integrase family, which are longer proteins and have relatively shorter identification sequences compared to tyrosine integrates. Bxb1 and φC31 are two prominent serine recombinases, and both have been shown to work within mammalian cell lines. When used as an invertase, Bxb1 identifies attB and attP sites, cuts at these sites, and inverts the DNA sequence in between these two markers. Bb1 integrase is capable of performing this process without additional cofactors, which has been confirmed by in vitro studies.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 192
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 466
    Illegal XhoI site found at 553
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 1105
    Illegal NgoMIV site found at 1192
    Illegal AgeI site found at 242
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 1300


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Categories
Parameters
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