Coding
Part:BBa_K957004
Designed by: Dylan Patrick Webster Group: iGEM12_Cornell (2012-09-25)
nah Operon for degradation of naphthalene to salicylate
One of two positively regulated operons of the NAH7 plasmid from Pseudomonas putida which encode the enzymes for metabolism of naphthalene via salicylate. When used with a BioBrick generator responsive to salicylate via the NahR activator (e.g. BBa_K957002 and BBa_K957003), this operon can function as part of a whole-cell biosensor for naphthalene.
Sequence and Features
Assembly Compatibility:
- 10INCOMPATIBLE WITH RFC[10]Illegal PstI site found at 1867
Illegal PstI site found at 5862 - 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 4122
Illegal PstI site found at 1867
Illegal PstI site found at 5862
Illegal NotI site found at 8165 - 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 5215
Illegal BamHI site found at 3200
Illegal BamHI site found at 5902
Illegal XhoI site found at 1311
Illegal XhoI site found at 3699
Illegal XhoI site found at 3851
Illegal XhoI site found at 9353 - 23INCOMPATIBLE WITH RFC[23]Illegal PstI site found at 1867
Illegal PstI site found at 5862 - 25INCOMPATIBLE WITH RFC[25]Illegal PstI site found at 1867
Illegal PstI site found at 5862
Illegal NgoMIV site found at 1804
Illegal NgoMIV site found at 3579
Illegal NgoMIV site found at 5453
Illegal NgoMIV site found at 6065
Illegal NgoMIV site found at 9378
Illegal AgeI site found at 642
Illegal AgeI site found at 3573
Illegal AgeI site found at 6281
Illegal AgeI site found at 8276 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 2921
Illegal BsaI site found at 3594
Illegal BsaI site found at 4185
Illegal BsaI site found at 5351
Illegal BsaI.rc site found at 2755
Illegal BsaI.rc site found at 5505
Illegal BsaI.rc site found at 7790
Illegal SapI.rc site found at 3285
Illegal SapI.rc site found at 3831
Illegal SapI.rc site found at 7682
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Categories
Parameters
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