Plasmid_Backbone

Part:BBa_K812051

Designed by: Cyrille Pauthenier   Group: iGEM12_Evry   (2012-09-24)


Golden brick version of pSB1K3 plasmid for Golden Gate and Golden Brick cloning

This is a modified version of pSB1K3 from the registry with the J4450 negative control. The biobrick sites are modified to incorporate a BsaI restriction site that enables the use of golden gate cloning and golden brick cloning to assemble full contructs in a single shot of digestion/ligation.

The complete protocol of the goldengate can be find in the original paper: Engler C, Gruetzner R, Kandzia R, Marillonnet S (2009) Golden Gate Shuffling: A One-Pot DNA Shuffling Method Based on Type IIs Restriction Enzymes. PLoS ONE 4(5): e5553. doi:10.1371/journal.pone.0005553

The Golden Brick assembly is an invention of the iGEM Evry 2012 Team. A complete description of the procedure can be find on our website: http://2012.igem.org/Team:Evry/GB

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2190
    Illegal XbaI site found at 2212
    Illegal SpeI site found at 1
    Illegal PstI site found at 23
  • 12
    INCOMPATIBLE WITH RFC[12]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2190
    Illegal SpeI site found at 1
    Illegal PstI site found at 23
  • 21
    INCOMPATIBLE WITH RFC[21]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2190
    Illegal XhoI site found at 1040
    Illegal XhoI site found at 2066
  • 23
    INCOMPATIBLE WITH RFC[23]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2190
    Illegal XbaI site found at 2212
    Illegal SpeI site found at 1
    Illegal PstI site found at 23
  • 25
    INCOMPATIBLE WITH RFC[25]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2190
    Illegal XbaI site found at 2212
    Illegal SpeI site found at 1
    Illegal PstI site found at 23
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal BsaI site found at 7
    Illegal BsaI.rc site found at 2206


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