Composite
Operon1

Part:BBa_K808006

Designed by: Valentina Herbring, Sebastian Palluk, Andreas Schmidt   Group: iGEM12_TU_Darmstadt   (2012-09-05)

putative terephtalate uptake operon1

putative terephtalate uptake operon1

AraProm_RBS_tctA-503_RBS_tctB-162_RBS_tphC

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 1144
    Illegal BamHI site found at 4173
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 2702
    Illegal NgoMIV site found at 3064
    Illegal NgoMIV site found at 3499
    Illegal NgoMIV site found at 3931
    Illegal AgeI site found at 979
    Illegal AgeI site found at 1947
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 2828
    Illegal SapI site found at 961


References

  • Fukuhara, Y., K. Inakazu, et al. (2010). "Characterization of the isophthalate degradation genes of Comamonas sp. strain E6." Appl Environ Microbiol 76(2): 519-527.
  • Kamimura, N., T. Aoyama, et al. (2010). "Characterization of the protocatechuate 4,5-cleavage pathway operon in Comamonas sp. strain E6 and discovery of a novel pathway gene." Appl Environ Microbiol 76(24): 8093-8101.
  • Winnen, B., R. N. Hvorup, et al. (2003). "The tripartite tricarboxylate transporter (TTT) family." Res Microbiol 154(7): 457-465.
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Categories
Parameters
None