DNA

Part:BBa_K4397003

Designed by: Rashik Chand   Group: iGEM22_NYU_Abu_Dhabi   (2022-10-02)


RNV95

Amyloid Beta Aptamer: RNV95

Target: Amyloid-Beta 40 monomer

Binding Affinity: 50 - 400 nM (SPR)


Usage and Biology

RNV95 is a DNA aptamer with ability to detect tetrameric/pentameric low-molecular-weight Aβ aggregates [1]. During Western Blot analysis, both RNV95 and anti-Aβ antibodies detect a high-molecular-weight aggregate between 75 and 100 kDa in low yields, RNV95 shows higher intensities in detecting Aβ band than the anti-Aβ antibody [1]. Moreover, RNV95 does not show the ∼15 kDa band corresponding tetrameric/pentameric Aβ aggregates in healthy control brain tissue samples which is indicative of the binding specificity of RNV95 to AD [1]. Therefore, according to this research RNV95 could be a better alternative to the characterized monoclonal anti-Aβ antibody to detect low-molecular-weight aggregates of Aβ in AD brain tissue by western blot [1].

[1] Chakravarthy, M., AlShamaileh, H., Huang, H., Tannenberg, R. K., Chen, S., Worrall, S., ... & Veedu, R. N. (2018). Development of DNA aptamers targeting low-molecular-weight amyloid-β peptide aggregates in vitro. Chemical Communications, 54(36), 4593-4596.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]



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Parameters
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