Coding

Part:BBa_K4389007

Designed by: Arsen Orazbek   Group: iGEM22_NU_Kazakhstan   (2022-10-05)


A27 protein encoding sequence

A24 protein from the Vaccinia virus

Usage and Biology

A27 is a 110 amino acids protein, that consist of the heparin-binding domain, a coiled-coil domain, and the A17 binding leucine zipper domain. The heparin-binding domain contains 21-34 amino acids and has the core sequence KKPE, which is 26-29 amino acids. KKPE is essential for heparin sulfate attachment. Coiled-coil domain, 43-84 amino acids, contributes to self-oligomerization in vitro. Two cysteines at 71 and 72 create a disulfide bond for the self-assembly of A27 and interact with A26. The crystal structure of A27 is a trimeric assembly, consisting of three α-helices, two parallel and one antiparallel. Trimerization can be observed in the N-terminal section. Interaction between trimers occurs at the C-terminal region

Reference

Chang, T. H., Chang, S. J., Hsieh, F. L., Ko, T. P., Lin, C. T., Ho, M. R., ... & Wang, A. H. (2013). Crystal structure of vaccinia viral A27 protein reveals a novel structure critical for its function and complex formation with A26 protein. PLoS pathogens, 9(8), e1003563.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None