Coding

Part:BBa_K4249000

Designed by: Douglas B.Kell and Irina Borodina   Group: iGEM22_HBUT-China   (2022-10-11)


The biosynthetic gene for ERG production from N.crassa that catalyzing the first enzymatic step

The genes we used here were codon-optimized for S. cerevisiae according to reference(van der Hoek, Darbani et al. 2019). In nature, ergothioneine is produced through two different pathways: the bacterial pathway and the fungal pathway. In bacteria, the reaction sequence is catalyzed by five enzymes, encoded by egtA-E genes arranged in an operon. But in fungi, the biosynthetic pathway is different, only two genes are needed here, egt1 and egt2. Comparing two catalytic pathways, fungal pathway is simpler and more efficient. Since S.cerevisiae cannot synthesize ergothioneine directly, we applied CRISPR-Cas9 technology to integrate two heterologous genes into the yeast genome, and these two genes are NcEgt1 and CpEgt2 . Egt1 is a nonheme iron enzyme that could simultaneously catalyze two reactions, including the methylation of histidine to hecynine and the conversion of hecynine to hercynylcysteine sulfoxide. After that, another enzyme called Egt2, hercynylcysteine S-oxide lyase, will combine with hercynylcysteine sulfoxide to form EGT.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 751
    Illegal EcoRI site found at 2078
    Illegal XbaI site found at 1435
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 751
    Illegal EcoRI site found at 2078
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 751
    Illegal EcoRI site found at 2078
    Illegal BglII site found at 613
    Illegal BglII site found at 1099
    Illegal BglII site found at 1432
    Illegal BglII site found at 2101
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 751
    Illegal EcoRI site found at 2078
    Illegal XbaI site found at 1435
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 751
    Illegal EcoRI site found at 2078
    Illegal XbaI site found at 1435
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
//cds
Parameters
protein