Coding

Part:BBa_K4041016

Designed by: Derek Zhang   Group: iGEM21_HKIS   (2021-10-21)


Expression Cassette for pET-Yafl-Ulp1

This is for the surface display of the protein Yafl-Ulp1 to cleave the SUMO-protein partner into SUMO and protein. Which in turn purifies the protein of choice without the use of tags. This method allows easy centrifugation to purify protein in a relatively pure output.

HKIS--cleav.png

Figure 2, Illustration of Cleavage system (brown Yafl Ulp1, Red fusion protein)

Source: https://amb-express.springeropen.com/articles/10.1186/s13568-020-00999-4

This system does not work well with system that does cannot bear the toxicity, like the BL21 (DE3) -gold cells, which has a high mRNA stability.

HKIS--yaflexpression.png

Figure 2, showing the expression of Yafl from our own test, pET-LO-SUMO and pET-LO-SUMO-tachyplesin system.

From the picture, it is suggested to use lysis resistant strains and other strains with high toxicity tolerance for the IPTG induction of the peptide, preferably in high enrichment broth including terrific broth or magic media.


Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal XbaI site found at 1189
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NotI site found at 3445
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 1147
    Illegal BglII site found at 1670
    Illegal BamHI site found at 2313
    Illegal BamHI site found at 2463
    Illegal BamHI site found at 2475
    Illegal BamHI site found at 2493
    Illegal BamHI site found at 2499
    Illegal XhoI site found at 3454
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal XbaI site found at 1189
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal XbaI site found at 1189
    Illegal AgeI site found at 2143
    Illegal AgeI site found at 2260
    Illegal AgeI site found at 3328
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None