Coding

Part:BBa_K3947002

Designed by: David Dimech   Group: iGEM21_MSP-Maastricht   (2021-10-01)


Mbb4 - Vanadium-Dependent Haloperoxidase

Gene sequence that was identified in the seaweed Asparagopsis taxiformis by (Thapa et al., 2020). It is an enzyme from the family of bromide peroxidases and catalyzes the following reaction: HBr + H2O2 → HOBr + H2O

The enzyme uses Vanadium as a co-factor in the catalysis of the bromoform. The active site features a vanadium oxide center attached to the protein via one histidine side chain. The enzymes catalyze the oxidation of bromide by hydrogen peroxide. Bromonium cation (Br+) that is generated attacks hydrocarbons (represented as R). They are only specific to the bromide and are unable to oxidize chloride at all. R-H + Br- + H2O2 -> R-Br + H2O2 + OH-

Sequence


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 264
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 346
    Illegal NgoMIV site found at 844
    Illegal AgeI site found at 1221
  • 1000
    COMPATIBLE WITH RFC[1000]

Reference

Thapa, H. R., Lin, Z., Yi, D., Smith, J. E., Schmidt, E. W., & Agarwal, V. (2020). Genetic and biochemical reconstitution of bromoform biosynthesis in asparagopsis lends insights into seaweed reactive oxygen species enzymology. ACS Chemical Biology, 15(6), 1662–1670. https://doi.org/10.1021/acschembio.0c00299

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