Composite
Part:BBa_K389015
Designed by: Jonas Aretz Group: iGEM10_Bielefeld-Germany (2010-09-28)
VirA/G reporter device luc
This BioBrick contains a complete VirA/G receptor system with a firefly luciferase (from Promega's pGL4.10[luc2] vector) under the control of a vir promoter as reporter gene.
Input: acetosyringone
Output: expression of luciferase
Usage and Biology
This BioBrick is for testing, characterizing and measuring the VirA/G signaling system. This system contains an unmutated virA, so it is possible to measure how the natural VirA/G system works and reacts. It is also possible to determine the basal transcription of the vir promoter and its activity after inducing the system with acetosyringone.
Important parameters
Experiment | Characteristic | Value |
---|---|---|
Transfer Function | Maximum induction level | 2.2 fold |
Maximum induction level reached | 200 µM acetosyringone | |
Hill coefficient | 1.09 | |
Switch Point | 31.6 µM acetosyringone | |
Doubling time / h | without plasmid | 1.98 |
carrying K389015 | 2.24 | |
carrying K389015 with 400 µM acetosyringone | 2.67 | |
Response time | Induction: exponential phase | >1 h |
Induction: begin of cultivation | max. induction at OD600 = 1 +/- 0.5 | |
Conformation analysis | ratio ccc monomer / % | 91 |
ratio ccc dimer / % | 3.7 | |
ratio oc forms / % | 5.3 |
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 7
Illegal NheI site found at 30
Illegal NheI site found at 647
Illegal NheI site found at 2581
Illegal NheI site found at 2604 - 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 1632
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 3769
Illegal NgoMIV site found at 5113
Illegal NgoMIV site found at 5134
Illegal AgeI site found at 4837 - 1000INCOMPATIBLE WITH RFC[1000]Illegal SapI.rc site found at 1768
Illegal SapI.rc site found at 5019
[edit]
Categories
Parameters
//cds/membrane/receptor
//chassis/prokaryote/ecoli
//function/reporter/light
//chassis/prokaryote/ecoli
//function/reporter/light
None |