Coding

Part:BBa_K3619006

Designed by: Isak Ingerholt   Group: iGEM20_Lund   (2020-09-13)


cDNA encoding the ani microbial peptide EAFP1.

cDNA encoding the protein Antifungal peptide 1 (EAFP1). The protein binds chitin and has a broad antifungal toxicity, it has proven antifungal activity against several plant pathogens [1].

The half maximal inhibitory concentration (IC50) against testes species was between 35 to 177 ug/ml. The proteins antifungal activity is sensitive to Ca ions, which could 100-fold the IC50 at a concentration of 5mM calcium. EAFP1 has no shown inhibitory activity towards bacteria. [2].

The protein contains 5 disulfide bridges, which may be problematic in bacterial expression.

Sources:

1. uniprot.org/uniprot/P83596

2. https://pubmed.ncbi.nlm.nih.gov/12067732/

For more information about the protein , visist the uniprot record P83596 [1].


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None