DNA
DW_lineL

Part:BBa_K3480001

Designed by: Yunzhi XING   Group: iGEM20_ECUST_China   (2020-10-19)


DNA Walker_lineL(for detection of N gene of SARS-CoV-2)

BBa_K3480001, what we called DW_lineL, is an oligonucleotide which used to build a nano machine called DNA Walker. DW_lineL is used to identify and bind potential viral genomes in the environment, thus promote the working of DNA Walker. Its 15 bases at the 3' end are paired with a conserved site in the N gene of SARS-CoV-2, while the other 25 bases at 5' end are all T. The oligoT is designed to help DW_lineL be linked to a solid carrier surface. For instance, we choose streptavidin magnetic beads as solid carrier to build our DNA Walker, than we need to modify a biotin at the 5' end of DW_lineL. The exist of oligoT can promote the flexibility of DW_lineL and reduce steric hindrance. DW_lineL can only work normally in DNA Walker. DW_lineL and DW_lineW will identify the 3' half and 5' half of the target sequence respectively.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
//dna
Parameters
biology