Device

Part:BBa_K3304106

Designed by: Sofia Moysiadou   Group: iGEM19_Thessaloniki   (2019-10-21)


Join Gate for the ELK1 specific CRN

This is the Join Gate of our formal CRN. It receives 3 inputs in the form of TAA(part: ) TBB(part: ) TRR(part: ). In our iteration, TBB is produced by the amount of available upstream Input Gates (part: BBa_K3304001) and the other inputs to the gate are introduced as auxiliary strands. In principle, both of them, however, could be introduced as orthogonal inputs, converting the Join Gate into a three-way logic AND gate. The gate, additionally, is the link that joins the Input Gate to the Fork Gate (part: BBa_K3304002) that will eventually produce the output of the CRN as measurable light and will allow for the amplification to occur. This Join Gate is designed to be derived from plasmid DNA by implementing PvuII cut sites at the beginning and the end, as well as Nb.BsrDI nicking sites that will prepare the double-stranded DNA block to be used in Strand Displacement reactions.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None