Plasmid

Part:BBa_K2813000

Designed by: Matthew Fischer   Group: iGEM18_Michigan   (2018-10-10)


SpCas9 without gRNA

This part is a Cas9 nuclease enzyme derived from Streptococcus pyogenes (Sp) that is able to cleave DNA at highly specific sites based on a guide RNA sequence. In nature, it serves as a small part of the larger CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) system which acts an immune system for the bacteria against bacteriophages. Specifically, Cas9 serves to seek out and cut the sequence that corresponds to thThis part is a Cas9 nuclease enzyme derived from Streptococcus pyogenes (Sp) that is able guide sequence given to it in the form of the guide RNA (gRNA). Additionally, it has a T7 RNA polymerase promoter (BBa_J64997), a T7 terminator, to control the translational frame and protein expression.

The LacI repressor protein is used to inducibly control the expression of the Cas9 protein in the plasmid. The LacI repressor protein will bind to the LacI operator sequence, which is upstream of the Cas9 promoter allowing expression to occur in the presence of allolactose or IPTG.


Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal XbaI site found at 1814
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 2980
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 5259
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal XbaI site found at 1814
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal XbaI site found at 1814
    Illegal NgoMIV site found at 1712
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None