Generator

Part:BBa_K2796060

Designed by: Tuoyu Zhou   Group: iGEM18_LZU-CHINA   (2018-10-08)


Vesicle attacker

This part named vesicle attacker consists of two of our main parts: exosome booster and miR attacker. Exosome booster could dramatically promote TIL cell to secret exosome while miR attacker will express different miR to inhibit migration, DNA synthesis, and invasion of gastric cancer cell. HRE operon is used to control exosome booster expression. When the cell senses the condition of hypoxia in tumor microenvironment, HIF-1(hypoxia inducible factor 1) will produce and bind HRE(hypoxia response elements), then activating the minimized CMV promoter, transcripting exosome booster . By adding biotin, ECOB-miniCMV promoter can be activated and express the downstream hsa-miR-135b-3p.Then it will be cut by dicer enzyme and become mature microRNA, thus playing the role of anti-tumor acitivity. GAL1 promoter can be activated by galactolipin and express hsa-miR-769-5p.TRE promoter is used to control the expression of downstream gene hsa-miR-942-5p by adding different concentration of tetracycline. SV40 terminator is added to the middle of different parts to avoid interaction of themselves.WPRE was used to enhances the export of unspliced mRNA from the nucleus into the cytoplasm. Terminators were added to the compound part to avoid interaction.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 482
    Illegal BglII site found at 2067
    Illegal BamHI site found at 5120
    Illegal XhoI site found at 5
    Illegal XhoI site found at 6430
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 4685
    Illegal NgoMIV site found at 5705
    Illegal NgoMIV site found at 7006
    Illegal NgoMIV site found at 8117
    Illegal AgeI site found at 2947
    Illegal AgeI site found at 3567
    Illegal AgeI site found at 5100
    Illegal AgeI site found at 5988
    Illegal AgeI site found at 7490
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 5154
    Illegal BsaI.rc site found at 6399
    Illegal SapI site found at 1657


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