DNA

Part:BBa_K2796047

Designed by: Shuangshuang Pu   Group: iGEM18_LZU-CHINA   (2018-10-04)


pGAL1- hsa-miR-769-5p

By adding galactolipin, GAL1 promoter can be activated and express the downstream interest gene hsa-miR-769-5p.Then it will be cut by dicer enzyme and become mature microRNA, thus playing the role of anti-tumor acitivity.

Biological information analysis

2018 LZU-CHINA 47 bio1.png

a.According to bioinformatics prediction analysis, miR-769-5p can inhibit 50 genes expression. The redder the color, the higher the gene expression, and the bluer the color, the lower the gene expression. As you can see from the diagram. When miR-769-5p expression was at a high level, most genes were at a low level. As the expression level of miR-769-5p gradually decreased, most genes showed high expression level. However, some gene expression levels are not linearly correlated, which may be due to the interaction between genes.

2018 LZU-CHINA 47 bio2.png

b.The gene pathways that miR-769-5p may affected and the interactions between these genes.

2018 LZU-CHINA 47 bio3.png

c.The interaction network between the same functional proteins affected by miR-769-5p.

2018 LZU-CHINA 47 bio4.png

d.According to bioinformatics prediction analysis, miR-769-5p can inhibit 50 genes expression. The redder the color, the higher the gene expression, and the bluer the color, the lower the gene expression. As you can see from the diagram. When miR-769-5p expression was at a high level, most genes were at a low level. As the expression level of miR-769-5p gradually decreased, most genes showed high expression level. However, some gene expression levels are not linearly correlated, which may be due to the interaction between genes.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal XhoI site found at 512
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 70
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 481


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