Composite

Part:BBa_K2683013

Designed by: Kristi Turton   Group: iGEM18_Lethbridge   (2018-10-08)


Arc Protein

The Arc protein is originally found in mammalian brain tissue. It is known to form capsid structures that can delivery RNA from one cell to the other; specifically neuronal cells. Arc has shown to have similar attributes to retroviral Gag proteins [1]. The sequence given is based on the gene found in mouse. This part has been Codon optimized for expression in E.coli .


In order to highly characterize the Arc protein, we have used a series of experiments including protein purification and Transmission Electron Microscopy.

T--Lethbridge--arcmin_pur.png

Figure 1- An 15% SDS-PAGE gel showing the purification of the arc protein. The protein was purified by running it through a sucrose cushion, dialyzing against 1XPBS and running it through a size exclusion column. The purified protein can be found at the size of about 45kDa.

T--Lethbridge--arcfull_sec.png

Figure 2- A chromatogram of the purification of Arc protein using size exclusion chromatography. Elutions were collected based on the peaks and used for further experiments and gel confirmation

T--Lethbridge--ArcFullTEM.png

Figure 1- The transmission electron microscopy image of the arc protein. The diameter of the capsid in about 30nm.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 603
  • 1000
    COMPATIBLE WITH RFC[1000]


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