Reporter

Part:BBa_K2610037

Designed by: Charlotte de Ceuninck van Capelle, Marjolein Crooijmans   Group: iGEM18_Leiden   (2018-10-10)


pCspA-GFP

This composite part features the regulatory part promoter CspA (BBa_K2610036) and the fluorescent protein GFP (BBa_E0040). It can be used to visualize upregulation of CspA. CspA, or cold shock protein A, binds to the CAAT-containing regions of cold-inducible promoters of the H-NS and GyrA proteins.

Usage and Biology

We, iGEM Leiden 2018, have designed this composite part as part of our project Fifty Shades of Stress. This reporter part allowed us to detect stress-induced changes in SoxS transcription. We have created this part in order to amplify the fluorescent signal measured after pCspA-GFP activation or downregulation (Figure 1). It is evident that CspA expression is repressed with various antimicrobial agents such as streptomycin, kanamycin and tetracycline.

T--Leiden--cspa-GFP.png

Figure 1. Median Fluorescence Intensity (MFI) in AU after 4 hour incubation with antimicrobial agents in various concentrations.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 945


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Parameters
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