Reporter

Part:BBa_K2610019

Designed by: Charlotte de Ceuninck van Capelle   Group: iGEM18_Leiden   (2018-10-09)


pDnaK-GFP

This reporter part features the promoter of the DnaK gene and the fluorescent reporter protein GFP (BBa_E0040).

DnaK is a major heat shock protein in Escherichia coli. It has been reported as an essential protein for cell growth at heightened temperatures. Other research has also demonstrated a role for DnaK in hydrogen peroxide resistance and reductive division. (Rockabrand et al, 1995)(Bukau et al, 1989)

For more information please refer to our [http://2018.igem.org/Team:Leiden/Results Results page].

Promoter DnaK

We, iGEM Leiden 2018, have designed this composite part as part of our project Fifty Shades of Stress. This reporter part allowed us to detect stress-induced changes in DnaK transcription (Figure 1)

T--Leiden--dnaK-GFP.png

Figure 2. Median Fluorescence Intensity (MFI) in AU after 4 hour incubation with antimicrobial agents in various concentrations.

We have, on request of iGEM Bordeaux, also tested hydroxymethylfurfural or HMF for stressful effects on Escherichia coli. Our data suggests a downregulation of DnaK in response to HMF, as summarised by Figure 2.

T--Leiden--dnaKHMF.png

Figure 2. Median Fluorescence Intensity measured by flow cytometry after treatment with HMF. HMF in these concentrations were not lethal to bacterial cells, data not shown.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 1110


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