Composite

Part:BBa_K2495001

Designed by: Adrienne Chang   Group: iGEM17_NYU_Abu_Dhabi   (2017-10-09)


Device expressing the putative O-antigen transporter under control of an arabinose inducible promote

Putative O-antigen transporter encoding sequence under the control of an arabinose inducible promoter and constitutive promoter. It is used to code for the O-antigen transporter characteristic of E.coli O157:H7 strain that produces Shiga-toxin.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 1205
    Illegal NheI site found at 1225
    Illegal NheI site found at 1248
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 1144
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 979
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 2108
    Illegal SapI site found at 961
    Illegal SapI site found at 1443

Experimental Validation

Throughout our project, we successfully ligated our gene rfbE to the pSB1CR linearized backbone and transformed it into competent DH5-alpha E. coli cells. The part was validated by running PCR on the gene fragment using primers BBa_K2495019 and BBa_K2495020. These primers amplified a region of approximately 1000 bp. Appropriate bands were seen in Lane 3, which indicated that the part was successfully ligated and transformed.

"NYUAD_pSB1C3_rfbE_validation.png"


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