Plasmid
pEX

Part:BBa_K243033

Designed by: Freiburg Bioware09   Group: iGEM09_Freiburg_bioware   (2009-10-20)

pEX


This is our main E. coli protein expression vector. To insert DNA fragments, the plasmid possesses the restriction sites XbaI NgoMIV and AgeI_SpeI_NotI_PstI. The IPTG-inducable plasmid vector contains the pBR322 origin of replication and a Shine-Dalgarno-Sequence.


Freiburg09 pEx.JPG


Usage and Biology

We used this vector containing an ampicillin resistance gene for the expression of single constructs such as the His-FluA-Split-Fok_i (BBa_K243010)construct. Simultaneous expression of the other Fok construct, His-Dig-Split-Fok_a (BBa_K243036) could be assured using the vector pJS419 since it confers chloramphenicol resistance to the host cell. This enables a positive selection of bacterial strains such as XL1-blue (Stratagene) cotransformed with both plasmids.


Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal suffix found in sequence at 2734
    Illegal XbaI site found at 1523
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal SpeI site found at 2735
    Illegal PstI site found at 2749
    Illegal NotI site found at 2742
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 1808
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal suffix found in sequence at 2735
    Illegal XbaI site found at 1523
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal suffix found in sequence at 2725
    Illegal XbaI site found at 1523
    Illegal NgoMIV site found at 1531
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 3800
    Illegal SapI.rc site found at 4799


[edit]
Categories
//plasmid/expression
Parameters
None