Coding

Part:BBa_K2144002

Designed by: Oskar hman   Group: iGEM16_Stockholm   (2016-10-12)


ESP capable of inhibiting biofilm

Esp, extracellular serine protease, is capable of inhibit the biofilm formation and nasal colonization of S. aureus. This by protelysing receptors essential for biofilm formation and prevention of eDNA exudation.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 431
    Illegal XhoI site found at 180
    Illegal XhoI site found at 1001
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 1254
    Illegal AgeI site found at 1377
  • 1000
    COMPATIBLE WITH RFC[1000]

Usage:

Esp, extracellular serine protease, is capable of inhibit the biofilm formation and nasal colonization of S. aureus. This by protelysing receptors essential for biofilm formation and prevention of eDNA exudation. Thus, the biofilm degrading properties of ESP can be used in applications concerning biofilm degradation and infectious diseases caused by S.Aureus. In our project the aim was to evaulate and use ESP’s abilities to disrupt and eridicate the biofilm formation S.Aureus.

The encoding part of the BioBrick is derived from BBaK531005 , made by iGEM Grinnell 2011. The T7 promoter (BBak525998) has been inserted to control protein expession under IPTG induction. To regulate the protein expression under T7 promoter control, E.coli containing a T7 polymerase must be used, for instance BL21(DE3).

Biology:

Extracellular serine protease (Esp) is secreted by a subset of Staphylococcus epidermidis, which is a non-pathogenic bacterium in human nasal cavity and skin. Staphylococcus epidermis prevent colonization and biofilm formation of S.Aureus.

One underlying mechanism for this is ESP’s ability to degrade proteins critical for the attachment of bacteria to the host; thus, changing S. aureus sessile form to planktonic form [10].


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