Generator

Part:BBa_K2068000

Designed by: Nithin Dharmaraj   Group: iGEM16_UCLA   (2016-09-07)


PCQuad 3.0 Wildtype

The PCQuad gene codes for the production of one subunit of a protein cage. Each subunit is made up of a dimer protein(M1 Matrix) and a trimer protein(Bromoperoxidase) fused by an alpha helical linker. Expression of this subunit will lead to the self assembly of a tetrahedral structured protein cage. Protein cages, are self assembling supramolecular protein structures where multiple protein subunits interact non covalently to form a higher order structure. Our protein cage, PCquad, is a 12 subunit cage where each subunit is a fusion of two naturally oligomerizing proteins -- a trimer(Bromoperoxidase) and a dimer(M1 Matrix). The alpha helical fusion protein that links the trimer and dimer fixes them in a very specific orientation allowing for self assembly once subunits interact with each other.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 408
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 105
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI site found at 768


[edit]
Categories
//awards/part_collection/2016
Parameters
None