Translational_Unit

Part:BBa_K2013020

Designed by: Mei Deng   Group: iGEM16_UESTC-China   (2016-10-12)


Sc Alcohol dehydrogenase 2

This part contains the sequence of coding Sc Alcohol dehydrogenase 2 that catalyzes Ketoisovalerate into isobutanol.In addition,In addition,we did codon optimization before synthesizing it to encode the target product successfully in E. coli.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 831
  • 1000
    COMPATIBLE WITH RFC[1000]


Experimental Validation

This part is validated through Four ways: amplification, PCR, Enzyme cutting and Sequence.

Amplification

Enzyme:KOD

Primer-F:5GAATTCGCGGCCGCTTCTAGAGTACTAGAGAAAGAGGAGAAATACTAGATGAGCATCCCG-3′

Primer-R:5′- GCGGGTCGTTATGTTGTGGATACCAGCAAATAATAATACTAGTAGCG-3′

Results

T--UESTC-China--BBa_K2013020-Amplification.png

PCR

Enzyme:Taq

Primer-F:5′-CCACCTGACGTCTAAGAAAC-3′

Primer-R:5′-GTATTACCGCCTTTGAGTGA-3′

Results

T--UESTC-China--BBa_K2013020-PCR.png

Double digestion

After the assembly ,the plasmid was transferred into the Competent E. coli top10. After culturing overnight in LB,we minipreped the plasmid for double digestion .The first cutting procedure was performed with EcoRI and EcoRV restriction endonuclease. The second cutting procedure was performed with PstI and NcoI restriction endonuclease.The plasmid was cutted in a 25μL system at 37 ℃ for 1 hours. The Electrophoresis was performed on a 1% Agarose glu

Results

T--UESTC-China--BBa_K2013020-Double_digestion.png

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