Coding

Part:BBa_K1938004

Designed by: Charlotte van de Velde, Sjoerd Seekles   Group: iGEM16_Leiden   (2016-10-13)


cld

Chlorite dismutase

Catalyzes the heme-dependent decomposition of chlorite to O2 and chloride with high efficiency and specificity. Used to detoxify chlorite, a by-product of the reduction of perchlorate, a primarily anthropogenic pollutant, in perchlorate-respiring bacteria.

Usage and Biology

The Leiden 2016 team used this part, but did not manage to build it. Exeter iGEM 2018 improved function by managing to express it and by confirming expression through a Western blot and assaying function by measuring oxygen production of Cld in the presence of chlorite, as shown below.

We've resubmitted this part under the part number BBa_K2695010 (https://parts.igem.org/Part:BBa_K2695010)

T--Exeter--Western_Blot_Cld_small_size.jpg

                                         Figure 5: Western blot for Cld constructs 
                    Expected molecular weights (kDa): A = 32.97 | B = 32.99 | C = 32.96 | D = 31.20 

The Western Blot displayed expression of chlorite dismutase for D. aromatica and therefore we have proved expression of our new part.


T--Exeter--Clark_Oxygen_Electrode_Bar_Chart_small.png

                                       WT = Wild Type E. coli (strain: BL21 (DE3))

Out of the parts collection of chlorite dismutase enzymes, D. aromatica cld was the most effective at producing oxygen. Therefore we have shown that our part is functional in E. coli.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Parameters
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