Composite

Part:BBa_K1847000

Designed by: Anna Fomitcheva, Lisa Baumgartner   Group: iGEM15_ETH_Zurich   (2015-08-24)

promoter-RBS- annexin AV

Annexin V is member of the annexin family of Ca+2 dependent proteins. Its function is not yet known. It binds to phosphatidylserine in a Ca+2-dependent fashion1. It is widely used for detection of apoptosis, as it binds with 0.5-1 nM affinity to phosphatidylserine, a phospholipid usually found in the inner membrane of the cell, which flips to the outer membrane in the event of apoptosis 2,3.

Usage and Biology

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]

Characterization

J23114-B0034-Annexin V was cloned into a high copy backbone (pSB1C3) and a low copy backbone (pSEVA371). As can be seen in the Western blot image below, annexing V does no have any detectable levels of expression with pSEVA371 but it is expressed with pSB1C3. ETH15_annexinV_expression_BBBB_pSEVA.png


When RBS BBa_B0032 was used instead of BBa_B0034 no expression of Annexin V was observed in the high copy number plasmid. ETHZ15_western_blot_B0032.png

References

  1. Bouter A. Placenta 2015 vol. 36, Supplement 1, S43–S49
  2. Pietkiewicz S. et al. J Immunol Meth 2015 vol. 423, 99–103
  3. Tait J.F. J Nucl Med October 2008 vol. 49 no. 10 1573-1576

Functional Parameters

dissociation_constant0.5-1 nM
familyAnnexins
[edit]
Categories
//cds/ligand
//chassis/prokaryote/ecoli
//direction/forward
//regulation/constitutive
//ribosome/prokaryote/ecoli
Parameters
dissociation_constant0.5-1 nM
familyAnnexins