Composite

Part:BBa_K133039

Designed by: Ana Lasic   Group: iGEM08_Slovenia   (2008-10-29)

T7-CF-UREB-RGD-Histop


This part is ligated into a plasmid with T7 promotor. The plasmid was then transformed into cells with T7 Phage. This enabled the expression of the protein.

The part consists of:

1. Chimeric fusion protein, which retains the central, most antigenic segment of H. pylori (hypervariable region) flagellin FlaA, while replacing the N- and C-terminal segment by the FliC flagellin from E. coli, which is responsible for the activation of TLR5 (176 AA from the N-terminal and 99 AA from the C-terminal). Thus, combining the right parts of flagellin of E. coli with that of H. pylori enables activation of innate immunity - a characteristic that flagellin of H. pylori alone does not posess - while presenting the antigen of H. pylori for antibody production.

2. UreB – beta subunit of H. pylori urease that we used as an antigen


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 1207
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 764
    Illegal BamHI site found at 1275
    Illegal BamHI site found at 2564
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 301
    Illegal AgeI site found at 1786
    Illegal AgeI site found at 2964
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 3271
    Illegal SapI.rc site found at 1672


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