Coding

Part:BBa_K129004

Designed by: Burak YILMAZ   Group: iGEM08_METU_Turkey   (2008-11-08)


LamB_HP-metal binding domain in LamB-153 residue

LamB tolerates insertions of long heterologous peptides at a permissive loop (between structural codons 153 and 154) exposed to the external medium without a loss of function.protein. The histidine-rich sequence Gly-His-His-Pro-His-Gly employed in LamB and called HP. HP represents one to three multiple repeats along the C-terminal part of the human plasma metal transport protein known as the histidine rich-glycoprotein(HRG. The HRG binds heme and various divalent heavy metal ions with the following apparent order of affinity: Cu21; Hg21 . Zn21 . Ni21 . Cd21 . Co21 . The HP sequence is believed to form surface metal binding sites (MBSs) of HRG, and it has been also successfully used to immobilize Cu21 and Zn21 on IMAC columns.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal prefix found in sequence at 1
    Illegal suffix found in sequence at 1316
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 1
    Illegal SpeI site found at 1317
    Illegal PstI site found at 1331
    Illegal NotI site found at 7
    Illegal NotI site found at 1324
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 1
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal prefix found in sequence at 1
    Illegal suffix found in sequence at 1317
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal prefix found in sequence at 1
    Illegal XbaI site found at 16
    Illegal SpeI site found at 1317
    Illegal PstI site found at 1331
    Illegal AgeI site found at 98
    Illegal AgeI site found at 1193
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
Parameters
None