Composite

Part:BBa_K1251000

Designed by: Howard G. Goldsweig   Group: iGEM14_CSWProteens   (2014-06-20)


RiAFP

This is a composite part consisting of a T7 promoter containing a lac operator, a RBS, the coding sequence for the antifreeze protein, RiAFP, a 6x His tag, a secretion peptide, and a double terminator. This part controls the expression of RiAFP. The expressed protein is tagged with an amino acid motif that consists of six histidine (His) residues fused to the C-terminus of RiAFP. Histidine tags are widely used because they are small and rarely interfere with the function, activity, or structure of target proteins. The polyhistidine-tag is to be used to detect the secreted protein via anti-polyhistidine-tag antibodies or alternatively by in-gel staining (SDS-PAGE) with fluorescent probes bearing metal ions. The HlyA is a signal peptide found in the C-terminal signal sequence of alpha-hemolysin (HlyA). It is used to target RiAFP for secretion via the Type I secretion pathway of gram-negative bacteria. Fusion of the HlyA signal peptide to RiAFP results in transport of the protein from the cytoplasm to the extracellular medium in a single step

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 1
    Illegal PstI site found at 632
    Illegal PstI site found at 859
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 1
    Illegal NheI site found at 185
    Illegal PstI site found at 632
    Illegal PstI site found at 859
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 1
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 1
    Illegal PstI site found at 632
    Illegal PstI site found at 859
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 1
    Illegal PstI site found at 632
    Illegal PstI site found at 859
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None