Deleted
Experience: None
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Plasmid

Part:BBa_K125010

Designed by: Margaret Ruzicka   Group: iGEM08_Hawaii   (2008-10-26)

Broad-Host-Range RSF1010 derived plasmid

All ccdb parts have been withdrawn from the Registry. Samples of parts containing the ccdB gene cannot be requested. - iGEM HQ

This Broad-Host-Range plasmid is derived from RSF1010. The replication proteins, the origin of vegetative replication, and the aadA gene were inserted into the Base Vector. The MPF system has been removed and replaced with the RP4 origin of transfer.

This plasmid has been converted to BioBrick format and is also more compact that the original version. The replication proteins with the origin of vegetative replication allows for autonomous replication in a broad range of gram negative bacteria. The oriT allows for mobilization by the self-transmissible plasmid RP4. The aadA region allows resistance to Spectinomycin and Streptomycin. The Base Vector provides an insulated BioBrick cloning site containing a high copy origin and the ccdB death gene which are both removed when a part in cloned in. This allows one to make a lot of the plasmid for cloning, and a means for positive selection.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal prefix found in sequence at 5885
    Illegal suffix found in sequence at 4559
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 5885
    Illegal NheI site found at 4735
    Illegal NheI site found at 5684
    Illegal SpeI site found at 4560
    Illegal PstI site found at 4574
    Illegal NotI site found at 4567
    Illegal NotI site found at 5891
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 5885
    Illegal BglII site found at 6341
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal prefix found in sequence at 5885
    Illegal suffix found in sequence at 4560
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal prefix found in sequence at 5885
    Illegal XbaI site found at 5900
    Illegal SpeI site found at 4560
    Illegal PstI site found at 4574
    Illegal NgoMIV site found at 4299
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 6229


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