Composite

Part:BBa_K1053206

Designed by: Yukimi Yamamoto   Group: iGEM13_Tokyo-NoKoGen   (2013-09-10)

Pconst.- RBS- YF1/FixJ-DT- Pfixk2- HHR*- GFP- DT

In dark, YF1 phospholylates FixJ response regulator and FixJ response regulator activates Pfixk2, so HHR* is expressed. HHR* contains GFP’s RBS. When HHR* is expressed, but this HHR is mutated in active site, so HHR doesn’t do self cleavage. GFP’s RBS isn’t exposed, so GFP isn’t expressed. This composition is used negative control.

Evaluation
The GFP fluorescence intensity was taken after main culture for 8 hours by Plate Reader in this evaluation method.

%E3%82%AD%E3%83%A3%E3%83%97%E3%83%81%E3%83%A311.PNG
Result Evaluation of transformed E.coli under the light or dark condition.

There is no clear difference of light and dark condition of HHR-GFPuv or HHR*-GFPuv. The cause of this result is that excitation light of GFP and YF is almost the same, we think. Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 2815
    Illegal XhoI site found at 2716
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 605
    Illegal NgoMIV site found at 677
    Illegal NgoMIV site found at 767
    Illegal NgoMIV site found at 785
    Illegal NgoMIV site found at 1271
    Illegal NgoMIV site found at 1564
    Illegal NgoMIV site found at 1658
    Illegal AgeI site found at 319
    Illegal AgeI site found at 1439
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 1328
    Illegal BsaI.rc site found at 2230


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Categories
Parameters
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