DNA
Part:BBa_J70030
Designed by: Julie Norville Group: Knight Lab (2008-12-07)
A BioScaffold Part (Uses PpiI), Protein Tail Remover see Part Design Page
When placed in a BioBrick assembly and cut with the restriction enzyme PpiI, this part will direct the restriction enzymes to cut outside the BioBrick scar
still in testing, uses restriction enzyme sites PpiI (2) PacI (2) MabI (2), will place in pSB1AK3 vector
See part design page or BBFRFC15, for details about use
This part can be made with the following oligos, which can be annealed and placed into an EcoRI/SpeI cut vector:
Version 1.1 Oligos (These oligos were made properly but did not produce transformants in first try.) EcoRINotI XbaI SpeI AATTCGCGGCCGCTTCT | AGAG CTGGTTCACCTGGTTAATTAATTAATT AAACCAGGTGAACGTGGTCTCTA (ctag) GCG | AT GATC gaattcgcggccgcttct agag ta ctagtagcggccgctgcag BioBricks Prefix BioBricks Suffix ctggttcacctggttaattaattaatt aaaccaggtgaacgtggtctc J70030 sequence These have melting temperatures around 55 degrees Celsius. Forward 1.1: AATTCGCGGCCGCTTCT Forward 2.1: AGAGCTGGTTCACCTGGTTAATTAATTAATTAAACCAGGTGAACGTGGTCTCTA Reverse 1.1: AATTAATTAATTAACCAGGTGAACCAGCTCTAGAAGCGGCCGCG Reverse 2.1: ctagTAGAGACCACGTTCACCTGGTTT
This part is currently being placed into the vector pSB2K4, which will allow hierarchical manipulations of the part.
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 43
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Categories
Parameters
//DNA/bioscaffold
None |