Coding

Part:BBa_I10010

Designed by: Irene Duke   Group: BE.109 2006 BE.109 Instructors   (2006-05-17)


ferA

The deduced amino acid sequence of ferA (found by Magnuson et al.) was reverse translated with optimizations to work best in E. coli. ferA encodes an 89kDa cytochrome involved in the reduction of Fe(III) in Geobacter sulfurreducens. The sequence contains 12 c-type haem-binding motifs (CXXCH), as well as a lipid-attachment site and an ATP/GTP binding site.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 626
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 103
    Illegal AgeI site found at 178
    Illegal AgeI site found at 496
    Illegal AgeI site found at 739
    Illegal AgeI site found at 1231
    Illegal AgeI site found at 1276
    Illegal AgeI site found at 1384
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
Parameters
None