RBS

Part:BBa_K879024

Designed by: Nien-Tsu Tseng   Group: iGEM12_Alberta   (2012-09-29)

rbs 4

The Salis RBS calculator was used to design this ribosome binding site (https://salis.psu.edu/software/). It is one of several RBS sequences of similar strength that were each tailored to a particular ORF, in this case, the lambda Cl repressor (BBa_K879016), and that showed significant sequence variation between each other to minimize the chances of intra-molecular recombination when used in combination. The RBS was calculated for each protein coding sequence with a target translation initiation strength set to a value of 50,000 for each of the ORFs used by the 2012 University of Alberta iGEM team using a common length constraint that began with the common transcriptional start site. The level of expression observed using this RBS for the lambda Cl repressor was not observed.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None