Coding

Part:BBa_K729002

Designed by: Bouran Sohrabi   Group: iGEM12_UCL_London   (2012-06-27)
Revision as of 13:12, 21 September 2012 by Jrutley (Talk | contribs) (Characterisation)

Laccase for Polyethylene Degradation

Laccase for the degradation of polyethylene and organic pollutants. Sequence pending.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 225
  • 1000
    COMPATIBLE WITH RFC[1000]



Description

Characterisation

Plastic degradation is mediated via a laccase protein. As such, we will be using an enzymatic activity assay to determine that the laccase enzyme is expressed. Laccase catalyses the oxidation of syringaldazine, a reaction that exhibits an observable OD change at 530nm. A sample of syringaldazine can be used as a blank in a spectrophotometer, against a sample containing syringaldazine and our laccase sample, allowing the rate of oxidation to be measured, and hence the enzymatic activity of laccase.

In order to determine the effectiveness of laccase in degrading plastic, we will expose strips of various types of plastic to the laccase expressing bacteria, before viewing the strips under a scanning electron microscope. This will allow us to compare the pitting in plastic samples treated with laccase, to the untreated samples, allowing us to determine the extent of plastic degradation.

Results

Our results indicate a significantly higher rate of oxidation for our BioBrick than the control. This indicates that our transformed E. Coli have successfully produced laccase, allowing it to oxidise the syringaldazine utilised in the laccase assay.

Modelling

Conclusion

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Categories
Parameters
None