Protein_Domain

Part:BBa_K648006

Designed by: Jim Rose, Alex Bina, Ben Alouidor, Brian Avison   Group: iGEM11_Penn_State   (2011-07-03)


Long 10AA Fusion Protein Linker with Standard 25 Prefix/Suffix

This is the longest of the three fusion protein linkers created by the Penn State 2011 iGEM team. It encodes for the ten amino acids GENLYFQSGG and has a prefix and suffix compatible with assembly standard 25. It is used in one of the variants of our Fast-Fusion protein reporter system.

This linker was used in a very interesting article, entitled “Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion”. The work addressed the use of the linker in question in the construction of genetic circuits. Being represented as a spacer region in the resulting rtTA-GFP fusion protein, obtained by in-frame insertion of the translated region of yEGFP into the KpnI site of rtTA. It has also been cited in a patent relating to a fc Receptor (fcrn) linking peptides and uses thereof. Where it has been described as a simple 10AA long fusion protein linker comprising glycine and serine residues, it can be used for the formation of cyclic dimeric peptides.



Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Functional Parameters

Isoelectric Point: 4,00
Molecular Weight: 1071,11Da


References

  1. Becskei A, Séraphin B, Serrano L. Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion. EMBO J. 2001;20(10):2528-2535.
[edit]
Categories
//proteindomain/linker
Parameters
None